microglycodb_gene_00030

Gene Name agaBb    
UniProt ID L8B3G2
NOTES - phase variation etc α-galactosidase
CAZy Family GH110
EC Number 3.2.1.-
PDB ID
Sugar/modification added α-linked galactoside of Blood group substance-B
Reviewed false
Organism Bifidobacterium bifidum
functions
sequence
publications
reaction
Data not found
Data not found

        10         20         30         40         50

MTAALAAALI CLAPLFSTNT AQAAGGDVVS VADYGAAADS GEDSAPAIIK 

        60         70         80         90        100

AVDKAKELAA EGKNVTIAFP KGRYDIYPDK AERRTLYVSN TVGTNSSYKD 

       110        120        130        140        150

KKIGILLEDT KNITVDGQGS DFVFHGKMTT FAAINSRNVT FKNFSVDFQV 

       160        170        180        190        200

PTVIDLTVEK VDAGAKTATV YVPEEYNYRL SGSNIEWYSD SSPYTGATYW 

       210        220        230        240        250

TASNALPYVQ LYDTKTGLTV RGDVWTNPIF QNVTGITDAG NHRLVFSYSS 

       260        270        280        290        300

MSDKLANATG ISYQMRQTTR DHPGVFLWKD KDVTLKGIDF RFLHGFGVVG 

       310        320        330        340        350

QSTDTITMDG LHFGTGEGTG RSTAGYADFV QMSGCKGVIT VANSSFSNPH 

       360        370        380        390        400

DDPINVHGTF LQVVEKISDT KIKVRYMHNE TAGFPSFFVG DQVEFMTKGD 

       410        420        430        440        450

MLPVSDSVRT VTAVDGPDGQ GGDMGAGSGS LTDIVLTLDS AIPSAVAVNS 

       460        470        480        490        500

HVVENITYTP EVNIHDNVFK ETPTRGILVT TRKKVTIENN LFDGMGMAGI 

       510        520        530        540        550

YISNDAQSWY ESGPTRDVTI RGNTFRRSGS DAILVEPTNP TVSTTDTVHK 

       560        570        580        590        600

NMTIEGNTFY VNGNRVLNAK SVSDLTFRDN KIYRENPDDT VTLGGDADVA 

       610        620        630        640        650

LAVGDTRRID ATASVSQVSG SRLFRLNGCK QVVFGGNTYD VGVKAGIDLA 

       660        670        680        690        700

NMGASEVNVS DDSAKVGADG LVPVTGSIAY VSDDAAVASV DQDGTITAVG 

       710        720        730        740        750

EGETTVRTYV IAGARRMPGS VVNVRVSAST ATAPTPGTSA DPLDGHPSSV 

       760        770        780        790        800

ATLSSATIDG LSKSFDFKPG TLYYFGADSA LTARAAFKAT DADASVKATL 

       810        820        830        840        850

NGKAIDATGA DVKLARGRNV IEATVTATDG ITANTYRFVI DRIGGVDTGL 

       860        870        880        890        900

AALSVGGNAI SVEHGRLQYT ASTMRSKTQV VASSFDPTAT LQLMRVNGSK 

       910        920        930        940        950

RVPVGDAQQG SLTRDVTVYQ GDNTFELDVT SGGSTVSYKV AVTGTDSVYA 

       960        970        980        990       1000

SDLAWESATS GDPNTNPVRK DKSCGNNTIT LWDGEKEQTF DKGIGTHAAS 

      1010       1020       1030       1040       1050

RIVYDVSDLG AIRFEAYVGV DRELTGVDRD HANVDFQVMI DGEVVFEKTA 

      1060       1070       1080       1090       1100

MQHDTPMAKV SVDIPEGAKT ITLAVGAGSE TWGDHADWAD ARFVGVEMPE 

      1110       1120       1130       1140       1150

APQVTGLAVT GEGVKDGKLD MTVGQSVGLG VTVTPEDAVD QSVTWTVAGD 

      1160       1170       1180       1190       1200

AVSVGEDGTV KALKAGTATV TVASVAVPSV TASVTVTVAE KADPDPDPKP 

      1210       1220       1230       1240       1250

DPEPDPDPTP KPDPDPDPNP NPGPGDEPGT TTPGDGQKPN TDKDADKNAG 

      1260       1270       1280       1290

KDKNQSIAAT GASIVPVGVL AVSMMAAGCA LTGRKRRES




1. Bifidobacterial ?-galactosidase with unique carbohydrate-binding module specifically acts on blood group B antigen.

PubMed: 23089618

doi:10.1093/glycob/cws142


2. A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research.

PubMed: 31477907